diff --git a/.metadata/.lock b/.metadata/.lock new file mode 100644 index 0000000..e69de29 diff --git a/.metadata/.log b/.metadata/.log new file mode 100644 index 0000000..0a5087c --- /dev/null +++ b/.metadata/.log @@ -0,0 +1,53 @@ +!SESSION 2014-01-02 17:34:21.930 ----------------------------------------------- +eclipse.buildId=debbuild +java.version=1.7.0_25 +java.vendor=Oracle Corporation +BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=fr_CA +Command-line arguments: -os linux -ws gtk -arch x86_64 + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.775 +!MESSAGE NLS unused message: EditTemplateDialog_title_Edit in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.780 +!MESSAGE NLS unused message: EditTemplateDialog_title_New in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.780 +!MESSAGE NLS unused message: EditTemplateDialog_error_NoName in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.780 +!MESSAGE NLS unused message: EditTemplateDialog_Name_label in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.780 +!MESSAGE NLS unused message: EditTemplateDialog_Description_label in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.780 +!MESSAGE NLS unused message: EditTemplateDialog_Context_label in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.781 +!MESSAGE NLS unused message: EditTemplateDialog_AutoInsert_label in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.781 +!MESSAGE NLS unused message: EditTemplateDialog_Pattern_label in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.781 +!MESSAGE NLS unused message: EditTemplateDialog_InsertVariable in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:34.781 +!MESSAGE NLS unused message: EditTemplateDialog_ContentAssist in: de.walware.ecommons.ui.internal.Messages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:37:46.938 +!MESSAGE NLS unused message: FindReplaceAction_label in: de.walware.ecommons.ui.SharedMessages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:45:58.675 +!MESSAGE NLS unused message: SubmitCode_ElementSelection_label in: de.walware.statet.r.internal.debug.ui.RLaunchingMessages + +!ENTRY org.eclipse.osgi 2 1 2014-01-02 17:45:58.676 +!MESSAGE NLS unused message: SubmitCode_UptoElementSelection_label in: de.walware.statet.r.internal.debug.ui.RLaunchingMessages + +!ENTRY org.eclipse.ui.ide 4 4 2014-01-02 18:01:01.149 +!MESSAGE Problems saving workspace + +!ENTRY org.eclipse.ui.ide 2 1 2014-01-02 18:01:01.150 +!MESSAGE Problems occurred while trying to save the state of the workbench. +!SUBENTRY 1 org.eclipse.core.resources 2 234 2014-01-02 18:01:01.150 +!MESSAGE The project description file (.project) for 'GeneralizedAsymmetricLaplace' was missing. This file contains important information about the project. A new project description file has been created, but some information about the project may have been lost. diff --git a/.metadata/.plugins/de.walware.ecommons.edb/derby.log b/.metadata/.plugins/de.walware.ecommons.edb/derby.log new file mode 100644 index 0000000..c29139d --- /dev/null +++ b/.metadata/.plugins/de.walware.ecommons.edb/derby.log @@ -0,0 +1,16 @@ +---------------------------------------------------------------- +Thu Jan 02 17:37:36 EST 2014: +Booting Derby version The Apache Software Foundation - Apache Derby - 10.8.2.2 - (1181258): instance a816c00e-0143-551a-cd0b-0000715d87d8 +on database directory /home/francois/git/GeneralizedAsymmetricLaplace/.metadata/.plugins/de.walware.statet.r.core/db with class loader org.eclipse.osgi.internal.baseadaptor.DefaultClassLoader@78e7aec5[de.walware.thirdparty-org.apache.derby.core:10.8.2000002.b201309081345E38sw(id=284)] +Loaded from file:/home/francois/.eclipse/org.eclipse.platform_3.8_155965261/plugins/de.walware.thirdparty-org.apache.derby.core_10.8.2000002.b201309081345E38sw.jar +java.vendor=Oracle Corporation +java.runtime.version=1.7.0_25-b30 +user.dir=/home/francois +derby.system.home=/home/francois/git/GeneralizedAsymmetricLaplace/.metadata/.plugins/de.walware.ecommons.edb +Database Class Loader started - derby.database.classpath='' +---------------------------------------------------------------- +Thu Jan 02 18:01:02 EST 2014: Shutting down Derby engine +---------------------------------------------------------------- +Thu Jan 02 18:01:03 EST 2014: +Shutting down instance a816c00e-0143-551a-cd0b-0000715d87d8 on database directory /home/francois/git/GeneralizedAsymmetricLaplace/.metadata/.plugins/de.walware.statet.r.core/db with class loader org.eclipse.osgi.internal.baseadaptor.DefaultClassLoader@78e7aec5[de.walware.thirdparty-org.apache.derby.core:10.8.2000002.b201309081345E38sw(id=284)] +---------------------------------------------------------------- diff --git a/.metadata/.plugins/de.walware.statet.r.core/db/log/log.ctrl b/.metadata/.plugins/de.walware.statet.r.core/db/log/log.ctrl new file mode 100644 index 0000000..e64eab8 Binary files /dev/null and b/.metadata/.plugins/de.walware.statet.r.core/db/log/log.ctrl differ diff --git a/.metadata/.plugins/de.walware.statet.r.core/db/log/log1.dat b/.metadata/.plugins/de.walware.statet.r.core/db/log/log1.dat new file mode 100644 index 0000000..892692b Binary files /dev/null and b/.metadata/.plugins/de.walware.statet.r.core/db/log/log1.dat differ diff --git a/.metadata/.plugins/de.walware.statet.r.core/db/log/logmirror.ctrl b/.metadata/.plugins/de.walware.statet.r.core/db/log/logmirror.ctrl new file mode 100644 index 0000000..e64eab8 Binary files /dev/null and b/.metadata/.plugins/de.walware.statet.r.core/db/log/logmirror.ctrl differ diff --git a/.metadata/.plugins/de.walware.statet.r.core/db/seg0/c10.dat 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b/.metadata/.plugins/de.walware.statet.r.core/db/seg0/ce1.dat new file mode 100644 index 0000000..a451f27 Binary files /dev/null and b/.metadata/.plugins/de.walware.statet.r.core/db/seg0/ce1.dat differ diff --git a/.metadata/.plugins/de.walware.statet.r.core/db/seg0/cf0.dat b/.metadata/.plugins/de.walware.statet.r.core/db/seg0/cf0.dat new file mode 100644 index 0000000..5d50bbf Binary files /dev/null and b/.metadata/.plugins/de.walware.statet.r.core/db/seg0/cf0.dat differ diff --git a/.metadata/.plugins/de.walware.statet.r.core/db/service.properties b/.metadata/.plugins/de.walware.statet.r.core/db/service.properties new file mode 100644 index 0000000..28c34b5 --- /dev/null +++ b/.metadata/.plugins/de.walware.statet.r.core/db/service.properties @@ -0,0 +1,22 @@ +#/home/francois/git/GeneralizedAsymmetricLaplace/.metadata/.plugins/de.walware.statet.r.core/db +# ******************************************************************** +# *** Please do NOT edit this file. *** +# *** CHANGING THE CONTENT OF THIS FILE MAY CAUSE DATA CORRUPTION. *** +# ******************************************************************** +#Thu Jan 02 17:37:44 EST 2014 +SysschemasIndex2Identifier=225 +SyscolumnsIdentifier=144 +SysconglomeratesIndex1Identifier=49 +SysconglomeratesIdentifier=32 +SyscolumnsIndex2Identifier=177 +SysschemasIndex1Identifier=209 +SysconglomeratesIndex3Identifier=81 +SystablesIndex2Identifier=129 +SyscolumnsIndex1Identifier=161 +derby.serviceProtocol=org.apache.derby.database.Database +SysschemasIdentifier=192 +derby.storage.propertiesId=16 +SysconglomeratesIndex2Identifier=65 +derby.serviceLocale=fr_CA +SystablesIdentifier=96 +SystablesIndex1Identifier=113 diff --git a/.metadata/.plugins/de.walware.statet.r.ui/dialog_settings.xml b/.metadata/.plugins/de.walware.statet.r.ui/dialog_settings.xml new file mode 100644 index 0000000..0273963 --- /dev/null +++ b/.metadata/.plugins/de.walware.statet.r.ui/dialog_settings.xml @@ -0,0 +1,7 @@ + +
+
+
+
+
+
diff --git a/.metadata/.plugins/org.eclipse.ant.ui/dialog_settings.xml b/.metadata/.plugins/org.eclipse.ant.ui/dialog_settings.xml new file mode 100644 index 0000000..5ca0b77 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.ant.ui/dialog_settings.xml @@ -0,0 +1,3 @@ + +
+
diff --git a/.metadata/.plugins/org.eclipse.cdt.core/.log b/.metadata/.plugins/org.eclipse.cdt.core/.log new file mode 100644 index 0000000..408f234 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.cdt.core/.log @@ -0,0 +1 @@ +*** SESSION janv. 02, 2014 17:34:39.57 ----------------------------------------- diff --git a/.metadata/.plugins/org.eclipse.cdt.make.core/specs.c b/.metadata/.plugins/org.eclipse.cdt.make.core/specs.c new file mode 100644 index 0000000..8b13789 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.cdt.make.core/specs.c @@ -0,0 +1 @@ + diff --git a/.metadata/.plugins/org.eclipse.cdt.make.core/specs.cpp b/.metadata/.plugins/org.eclipse.cdt.make.core/specs.cpp new file mode 100644 index 0000000..8b13789 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.cdt.make.core/specs.cpp @@ -0,0 +1 @@ + diff --git a/.metadata/.plugins/org.eclipse.cdt.ui/dialog_settings.xml b/.metadata/.plugins/org.eclipse.cdt.ui/dialog_settings.xml new file mode 100644 index 0000000..5ca0b77 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.cdt.ui/dialog_settings.xml @@ -0,0 +1,3 @@ + +
+
diff --git a/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/history.version b/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/history.version new file mode 100644 index 0000000..25cb955 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/history.version @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/properties.index b/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/properties.index new file mode 100644 index 0000000..e6dfd22 Binary files /dev/null and b/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/properties.index differ diff --git a/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/properties.version b/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/properties.version new file mode 100644 index 0000000..6b2aaa7 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.resources/.root/.indexes/properties.version @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/.metadata/.plugins/org.eclipse.core.resources/.root/1.tree b/.metadata/.plugins/org.eclipse.core.resources/.root/1.tree new file mode 100644 index 0000000..29db05a Binary files /dev/null and b/.metadata/.plugins/org.eclipse.core.resources/.root/1.tree differ diff --git a/.metadata/.plugins/org.eclipse.core.resources/.safetable/org.eclipse.core.resources b/.metadata/.plugins/org.eclipse.core.resources/.safetable/org.eclipse.core.resources new file mode 100644 index 0000000..9e02a88 Binary files /dev/null and b/.metadata/.plugins/org.eclipse.core.resources/.safetable/org.eclipse.core.resources differ diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.console.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.console.ui.prefs new file mode 100644 index 0000000..5e67237 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.console.ui.prefs @@ -0,0 +1,2 @@ +de.walware.statet.r.templates.rsnippets= +eclipse.preferences.version=1 diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.core.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.core.prefs new file mode 100644 index 0000000..e0903b7 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.core.prefs @@ -0,0 +1,17 @@ +eclipse.preferences.version=1 +r.environments/default_configuration.name=user-local--1hncn76sw23s5 +r.environments/network.use_eclipse=true +r.environments/user-local--1hncn76sw23s5/env.r_bits.count=64 +r.environments/user-local--1hncn76sw23s5/env.r_doc.dir=/usr/share/R/doc +r.environments/user-local--1hncn76sw23s5/env.r_home=/usr/lib/R +r.environments/user-local--1hncn76sw23s5/env.r_include.dir=/usr/share/R/include +r.environments/user-local--1hncn76sw23s5/env.r_libs.r.common= +r.environments/user-local--1hncn76sw23s5/env.r_libs.r.default=${env_var\:R_HOME}/library +r.environments/user-local--1hncn76sw23s5/env.r_libs.r.site=/usr/local/lib/R/site-library\u001E${env_var\:R_HOME}/site-library\u001E${env_var\:R_HOME}/library +r.environments/user-local--1hncn76sw23s5/env.r_libs.r.user=${user_home}/R/x86_64-pc-linux-gnu-library/3.0 +r.environments/user-local--1hncn76sw23s5/env.r_os.type=unix +r.environments/user-local--1hncn76sw23s5/env.r_share.dir=/usr/share/R/share +r.environments/user-local--1hncn76sw23s5/env.sub_arch=x86_64 +r.environments/user-local--1hncn76sw23s5/name=R-3.0.1 +r.environments/user-local--1hncn76sw23s5/type=user-local +r.environments/version=2 diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.ui.prefs new file mode 100644 index 0000000..565f933 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/de.walware.statet.r.ui.prefs @@ -0,0 +1,3 @@ +eclipse.preferences.version=1 +useAnnotationsPrefPage=true +useQuickDiffPrefPage=true diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.debug.core.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.debug.core.prefs new file mode 100644 index 0000000..b8c9267 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.debug.core.prefs @@ -0,0 +1,2 @@ +eclipse.preferences.version=1 +org.eclipse.cdt.debug.core.cDebug.default_source_containers=\n\n\n\n\n\n\n\n diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.dsf.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.dsf.ui.prefs new file mode 100644 index 0000000..2c7c1b9 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.dsf.ui.prefs @@ -0,0 +1,2 @@ +eclipse.preferences.version=1 +useAnnotationsPrefPage=true diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.ui.prefs new file mode 100644 index 0000000..5e2da66 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.cdt.ui.prefs @@ -0,0 +1,4 @@ +eclipse.preferences.version=1 +spelling_locale_initialized=true +useAnnotationsPrefPage=true +useQuickDiffPrefPage=true diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.core.resources.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.core.resources.prefs new file mode 100644 index 0000000..dffc6b5 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.core.resources.prefs @@ -0,0 +1,2 @@ +eclipse.preferences.version=1 +version=1 diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.core.variables.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.core.variables.prefs new file mode 100644 index 0000000..0cc508a --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.core.variables.prefs @@ -0,0 +1,2 @@ +eclipse.preferences.version=1 +org.eclipse.core.variables.valueVariables=\n\n diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.debug.core.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.debug.core.prefs new file mode 100644 index 0000000..8f0d0d6 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.debug.core.prefs @@ -0,0 +1,5 @@ +//org.eclipse.debug.core.PREFERRED_DELEGATES/org.eclipse.cdt.launch.applicationLaunchType=org.eclipse.cdt.dsf.gdb.launch.localCLaunch,debug;org.eclipse.cdt.cdi.launch.localCLaunch,run +//org.eclipse.debug.core.PREFERRED_DELEGATES/org.eclipse.cdt.launch.attachLaunchType=org.eclipse.cdt.dsf.gdb.launch.attachCLaunch,debug +//org.eclipse.debug.core.PREFERRED_DELEGATES/org.eclipse.cdt.launch.postmortemLaunchType=org.eclipse.cdt.dsf.gdb.launch.coreCLaunch,debug +eclipse.preferences.version=1 +org.eclipse.debug.core.PREF_DELETE_CONFIGS_ON_PROJECT_DELETE=false diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.debug.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.debug.ui.prefs new file mode 100644 index 0000000..412b264 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.debug.ui.prefs @@ -0,0 +1,5 @@ +eclipse.preferences.version=1 +org.eclipse.debug.ui.PREF_FILTER_LAUNCH_CLOSED=false +org.eclipse.debug.ui.PREF_FILTER_LAUNCH_DELETED=false +org.eclipse.debug.ui.PREF_LAUNCH_PERSPECTIVES=\n\n +org.eclipse.debug.ui.switch_to_perspective=always diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.core.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.core.prefs new file mode 100644 index 0000000..f42de36 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.core.prefs @@ -0,0 +1,7 @@ +eclipse.preferences.version=1 +org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled +org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.7 +org.eclipse.jdt.core.compiler.compliance=1.7 +org.eclipse.jdt.core.compiler.problem.assertIdentifier=error +org.eclipse.jdt.core.compiler.problem.enumIdentifier=error +org.eclipse.jdt.core.compiler.source=1.7 diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.launching.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.launching.prefs new file mode 100644 index 0000000..bd040f4 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.launching.prefs @@ -0,0 +1,5 @@ +PREF_VM_INSTALL_SYSTEM_PROPERTY.org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType.1388702773728.java.vm.name=OpenJDK 64-Bit Server VM +PREF_VM_INSTALL_SYSTEM_PROPERTY.org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType.1388702773728.os.arch=amd64 +PREF_VM_INSTALL_SYSTEM_PROPERTY.org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType.1388702773728.sun.arch.data.model=64 +eclipse.preferences.version=1 +org.eclipse.jdt.launching.PREF_VM_XML=\n\n\n\n\n\n diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.ui.prefs new file mode 100644 index 0000000..f3c33f4 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.jdt.ui.prefs @@ -0,0 +1,14 @@ +content_assist_proposals_background=252,252,252 +content_assist_proposals_foreground=33,33,33 +eclipse.preferences.version=1 +fontPropagated=true +org.eclipse.jdt.internal.ui.navigator.layout=2 +org.eclipse.jdt.ui.editor.tab.width= +org.eclipse.jdt.ui.formatterprofiles.version=12 +org.eclipse.jdt.ui.javadoclocations.migrated=true +org.eclipse.jface.textfont=1|Monospace|10.0|0|GTK|1|; +proposalOrderMigrated=true +spelling_locale_initialized=true +tabWidthPropagated=true +useAnnotationsPrefPage=true +useQuickDiffPrefPage=true diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.editors.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.editors.prefs new file mode 100644 index 0000000..61f3bb8 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.editors.prefs @@ -0,0 +1,2 @@ +eclipse.preferences.version=1 +overviewRuler_migration=migrated_3.1 diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.ide.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.ide.prefs new file mode 100644 index 0000000..f105d4f --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.ide.prefs @@ -0,0 +1,6 @@ +SWITCH_PERSPECTIVE_ON_PROJECT_CREATION=always +TASKS_FILTERS_MIGRATE=true +eclipse.preferences.version=1 +platformState=1388701238267 +quickStart=false +tipsAndTricks=true diff --git a/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.prefs b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.prefs new file mode 100644 index 0000000..08076f2 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.core.runtime/.settings/org.eclipse.ui.prefs @@ -0,0 +1,2 @@ +eclipse.preferences.version=1 +showIntro=false diff --git a/.metadata/.plugins/org.eclipse.debug.core/.launches/MyConsole.launch b/.metadata/.plugins/org.eclipse.debug.core/.launches/MyConsole.launch new file mode 100644 index 0000000..8300e39 --- /dev/null +++ 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diff --git a/.metadata/.plugins/org.eclipse.jdt.core/invalidArchivesCache b/.metadata/.plugins/org.eclipse.jdt.core/invalidArchivesCache new file mode 100644 index 0000000..593f470 Binary files /dev/null and b/.metadata/.plugins/org.eclipse.jdt.core/invalidArchivesCache differ diff --git a/.metadata/.plugins/org.eclipse.jdt.core/nonChainingJarsCache b/.metadata/.plugins/org.eclipse.jdt.core/nonChainingJarsCache new file mode 100644 index 0000000..593f470 Binary files /dev/null and b/.metadata/.plugins/org.eclipse.jdt.core/nonChainingJarsCache differ diff --git a/.metadata/.plugins/org.eclipse.jdt.core/variablesAndContainers.dat b/.metadata/.plugins/org.eclipse.jdt.core/variablesAndContainers.dat new file mode 100644 index 0000000..46ba64d Binary files /dev/null and b/.metadata/.plugins/org.eclipse.jdt.core/variablesAndContainers.dat differ diff --git a/.metadata/.plugins/org.eclipse.jdt.launching/.install.xml b/.metadata/.plugins/org.eclipse.jdt.launching/.install.xml new file mode 100644 index 0000000..66d2ea2 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.jdt.launching/.install.xml @@ -0,0 +1,4 @@ + + + + diff --git a/.metadata/.plugins/org.eclipse.jdt.launching/libraryInfos.xml b/.metadata/.plugins/org.eclipse.jdt.launching/libraryInfos.xml new file mode 100644 index 0000000..6f3eb14 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.jdt.launching/libraryInfos.xml @@ -0,0 +1,47 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/.metadata/.plugins/org.eclipse.jdt.ui/OpenTypeHistory.xml b/.metadata/.plugins/org.eclipse.jdt.ui/OpenTypeHistory.xml new file mode 100644 index 0000000..a4ee3cb --- /dev/null +++ b/.metadata/.plugins/org.eclipse.jdt.ui/OpenTypeHistory.xml @@ -0,0 +1,2 @@ + + diff --git a/.metadata/.plugins/org.eclipse.jdt.ui/QualifiedTypeNameHistory.xml b/.metadata/.plugins/org.eclipse.jdt.ui/QualifiedTypeNameHistory.xml new file mode 100644 index 0000000..9e390f5 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.jdt.ui/QualifiedTypeNameHistory.xml @@ -0,0 +1,2 @@ + + diff --git a/.metadata/.plugins/org.eclipse.pde.core/.cache/clean-cache.properties b/.metadata/.plugins/org.eclipse.pde.core/.cache/clean-cache.properties new file mode 100644 index 0000000..c6e5509 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.pde.core/.cache/clean-cache.properties @@ -0,0 +1,2 @@ +#Cached timestamps +#Thu Jan 02 18:01:01 EST 2014 diff --git a/.metadata/.plugins/org.eclipse.ui.cheatsheets/de.walware.statet.r.cheatSheetContent.RConsoleGettingStarted.xml b/.metadata/.plugins/org.eclipse.ui.cheatsheets/de.walware.statet.r.cheatSheetContent.RConsoleGettingStarted.xml new file mode 100644 index 0000000..b5662fd --- /dev/null +++ b/.metadata/.plugins/org.eclipse.ui.cheatsheets/de.walware.statet.r.cheatSheetContent.RConsoleGettingStarted.xml @@ -0,0 +1,7 @@ + + + + + + + \ No newline at end of file diff --git a/.metadata/.plugins/org.eclipse.ui.cheatsheets/history.xml b/.metadata/.plugins/org.eclipse.ui.cheatsheets/history.xml new file mode 100644 index 0000000..6fbfa2d --- /dev/null +++ b/.metadata/.plugins/org.eclipse.ui.cheatsheets/history.xml @@ -0,0 +1,6 @@ + + + + + + \ No newline at end of file diff --git a/.metadata/.plugins/org.eclipse.ui.ide/dialog_settings.xml b/.metadata/.plugins/org.eclipse.ui.ide/dialog_settings.xml new file mode 100644 index 0000000..4f52ac6 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.ui.ide/dialog_settings.xml @@ -0,0 +1,22 @@ + +
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diff --git a/.metadata/.plugins/org.eclipse.ui.workbench/workbench.xml b/.metadata/.plugins/org.eclipse.ui.workbench/workbench.xml new file mode 100644 index 0000000..848bcfc --- /dev/null +++ b/.metadata/.plugins/org.eclipse.ui.workbench/workbench.xml @@ -0,0 +1,262 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/.metadata/.plugins/org.eclipse.ui.workbench/workingsets.xml b/.metadata/.plugins/org.eclipse.ui.workbench/workingsets.xml new file mode 100644 index 0000000..4fc2d87 --- /dev/null +++ b/.metadata/.plugins/org.eclipse.ui.workbench/workingsets.xml @@ -0,0 +1,4 @@ + + + + \ No newline at end of file diff --git a/.metadata/version.ini b/.metadata/version.ini new file mode 100644 index 0000000..c51ff74 --- /dev/null +++ b/.metadata/version.ini @@ -0,0 +1 @@ +org.eclipse.core.runtime=1 \ No newline at end of file diff --git a/.project b/.project new file mode 100644 index 0000000..f12df2d --- /dev/null +++ b/.project @@ -0,0 +1,19 @@ + + + GeneralizedAsymmetricLaplace + + + + + + de.walware.statet.r.builders.RSupport + + + + + + de.walware.statet.base.StatetNature + de.walware.statet.r.RNature + de.walware.statet.r.RPkgNature + + diff --git a/.settings/de.walware.r.core.prefs b/.settings/de.walware.r.core.prefs new file mode 100644 index 0000000..cd162b1 --- /dev/null +++ b/.settings/de.walware.r.core.prefs @@ -0,0 +1,2 @@ +RProjectBuild/Package.name=GeneralizedAsymmetricLaplace +eclipse.preferences.version=1 diff --git a/DESCRIPTION b/DESCRIPTION new file mode 100644 index 0000000..cfbe94a --- /dev/null +++ b/DESCRIPTION @@ -0,0 +1,11 @@ +Package: GeneralizedAsymmetricLaplace +Title: Generalized Asymmetric Laplace Distribution +Version: 0.1 +Date: 2014-01-02 +Author: Francois Pelletier +Maintainer: Francois Pelletier +Description: This is a package gathering different functions to work with the + Generalized Asymmetric Laplace distribution +Suggests: + MASS +License: GPL-3 diff --git a/NAMESPACE b/NAMESPACE new file mode 100644 index 0000000..e69de29 diff --git a/R/characteristicfunction.R b/R/characteristicfunction.R new file mode 100644 index 0000000..e88a6ea --- /dev/null +++ b/R/characteristicfunction.R @@ -0,0 +1,44 @@ +# Characteristic function of GAL distribution +# +# Author: Francois Pelletier +# +# LGPL 3.0 +############################################################################### + +#' Characteristic function of GAL distribution +#' @param u Transform variate +#' @param param Parameter vector +#' @param type Choose between "mu" or "kappa" parametrization +#' @param log Boolean for log-parameters +#' @return Characteristic function value at point u for given parameter vector +#' +#' @author Francois Pelletier + +characteristicfn <- function(u,param,type="mu",log=FALSE) +{ + if(log) + { + if(type=="mu") + { + exp(1i*exp(param[1])*u)*(1+(exp(param[2])^2*u^2)/2-1i*exp(param[3])*u)^(-exp(param[4])) + } + if(type=="kappa") + { + exp(1i*exp(param[1])*u)*(1+(exp(param[2])^2*u^2)/2-(1/2*1i)* + exp(param[2])*sqrt(2)*(1/exp(param[3])-exp(param[3]))*u)^(-exp(param[4])) + } + } + else + { + if(type=="mu") + { + exp(1i*param[1]*u)*(1+(param[2]^2*u^2)/2-1i*param[3]*u)^(-param[4]) + } + if(type=="kappa") + { + exp(1i*param[1]*u)*(1+(param[2]^2*u^2)/2-(1/2*1i)* + param[2]*sqrt(2)*(1/param[3]-param[3])*u)^(-param[4]) + } + } +} + diff --git a/man/characteristicfn.Rd b/man/characteristicfn.Rd new file mode 100644 index 0000000..e4b3056 --- /dev/null +++ b/man/characteristicfn.Rd @@ -0,0 +1,27 @@ +\name{characteristicfn} +\alias{characteristicfn} +\title{Characteristic function of GAL distribution} +\usage{ +characteristicfn(u, param, type = "mu", log = FALSE) +} +\arguments{ + \item{u}{Transform variate} + + \item{param}{Parameter vector} + + \item{type}{Choose between "mu" or "kappa" + parametrization} + + \item{log}{Boolean for log-parameters} +} +\value{ +Characteristic function value at point u for given +parameter vector +} +\description{ +Characteristic function of GAL distribution +} +\author{ +Francois Pelletier +} +